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代表性论文

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Sinobacterium caligoides gen. nov., sp nov., a new member of the family Oceanospirillaceae isolated from the South China Sea, and emended description of Amphritea japonica.

发布时间:2014-01-01

Jianqiang Su, Yanyan Zhou, Qiliang Lai,Xinyi Li,Peiyan Dong,Xiaoru Yang,Bangzhou Zhang,Jinlong Zhang,Xiaowei Zheng,Yun Tian, Tianling Zheng,International Journal of Systematic and Evolutionary Microbiology,2013. 63: 2095-2100.

A taxonomic study was carried out on strain SCSWE24T, isolated from a seawater sample collected from the South China Sea. Cells of strain SCSWE24Twere Gram-negative, rod-shaped, non-motile, moderately halophilic and capable of reducing nitrate to nitrite. Growth was observed at salinities from 1.5 to 4.5% and at 4–37 °C; it was unable to degrade gelatin. The dominant fatty acids (>15%) were summed feature 3 (C16:1ω7cand/or C16:1ω6c; 50.4%) and C16: 0(21.1%). The G+C content of the chromosomal DNA was 58.8 mol%. 16S rRNA gene sequence comparisons showed that strain SCSWE24Twas most closely related to an uncultured bacterium clone Tun3b.F5 (98%; GenBank accession no.FJ169216), and showed 92% similarity to an endosymbiont bacterium from the bone-eating wormOsedax mucofloris(clone Omu 9 c4791; FN773233). Levels of similarity between strain SCSWE24Tand type strains of recognized species in the familyOceanospirillaceaewere less than 93%; the highest similarity was 92%, to bothAmphriteajaponicaJAMM 1866Tand ‘Oceanicoccus sagamiensis’ PZ-5. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain SCSWE24Tformed a distinct evolutionary lineage within the familyOceanospirillaceae. Strain SCSWE24Twas distinguishable from members of phylogenetically related genera by differences in several phenotypic properties. On the basis of the phenotypic and phylogenetic data, strain SCSWE24Trepresents a novel species of a new genus, for which the nameSinobacteriumcaligoidesgen. nov., sp. nov. is proposed. The type strain ofSinobacteriumcaligoidesis SCSWE24T (=CCTCC AB 209289T=LMG 25705T=MCCC 1F01088T). An emended description ofAmphriteajaponicais also provided.

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